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  5. Dcu_g10640

Dcu_g10640


Description : not classified & original description: none


Gene families : OG0001091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10640

Target Alias Description ECC score Gene Family Method Actions
Adi_g020359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0017.g014456 No alias not classified & original description: CDS=94-1260 0.03 OrthoFinder output from all 47 species
Cba_g13299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G065800.1 Ceric.05G065800 not classified & original description: pacid=50578796... 0.03 OrthoFinder output from all 47 species
Ceric.23G017500.1 Ceric.23G017500 not classified & original description: pacid=50610807... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020941.47 No alias No description available 0.01 OrthoFinder output from all 47 species
Len_g03749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06314 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 49 258
No external refs found!