Aliases : ATDRH1, DRH1
Description : not classified & original description: none
Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00005p00263980 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00064p00050700 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00096p00079870 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G55150 | No alias | DEA(D/H)-box RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G06480 | No alias | DEAD box RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g020036 | ATDRH1, DRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g024667 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057398 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g42061 | ATDRH1, DRH1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ala_g14759 | ATDRH1, DRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g15097 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0020.g015531 | ATDRH1, DRH1 | not classified & original description: CDS=33-2831 | 0.05 | OrthoFinder output from all 47 species | |
Ceric.21G038500.1 | Ceric.21G038500 | regulatory RNA helicase *(RH20/RH30) of virus... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01016847001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
Gb_10302 | ATDRH1, DRH1 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_31459 | No alias | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g10050.2 | LOC_Os01g10050 | pre-mRNA splicing regulator (DDX5) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g36860.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g68320.2 | LOC_Os01g68320 | pre-mRNA splicing regulator (DDX5) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g46240.1 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Len_g17375 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g51090 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g05034 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g13618 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g39840 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_5118g0010 | ATDRH1, DRH1 | ATP-dependent RNA helicase-like protein DB10... | 0.03 | OrthoFinder output from all 47 species | |
Mp3g07940.1 | No alias | pre-mRNA splicing regulator (DDX5) | 0.02 | OrthoFinder output from all 47 species | |
Mp6g12960.1 | ATDRH1, DRH1 | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g14167 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g08678 | ATDRH1, DRH1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g19068 | No alias | regulatory RNA helicase *(RH20/RH30) of virus... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g15938 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29066 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057760.4.1 | Solyc01g057760 | DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Solyc03g112350.4.1 | Solyc03g112350 | pre-mRNA splicing regulator (DDX5) | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g035130.2.1 | ATDRH1, DRH1,... | ATP-dependent RNA helicase-like protein DB10... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g044860.3.1 | Solyc12g044860 | DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10612 | ATDRH1, DRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020727_P006 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020972_P005 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027719_P003 | ATDRH1, DRH1,... | DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |