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  5. Dcu_g10525

Dcu_g10525


Description : not classified & original description: none


Gene families : OG0007043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g10525

Target Alias Description ECC score Gene Family Method Actions
AT1G03910 No alias EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13... 0.03 OrthoFinder output from all 47 species
Ala_g14952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g57675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G082000.1 Ceric.14G082000 not classified & original description: pacid=50634889... 0.04 OrthoFinder output from all 47 species
Dde_g08230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033725001 No alias Cactin OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g58590.1 LOC_Os03g58590 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 644.0) 0.02 OrthoFinder output from all 47 species
Mp1g18180.1 No alias Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 645.0) 0.02 OrthoFinder output from all 47 species
Smo107633 No alias Cactin OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo403675 No alias Cactin OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g085410.3.1 Solyc10g085410 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 696.0) 0.05 OrthoFinder output from all 47 species
Zm00001e006029_P001 Zm00001e006029 Cactin OS=Arabidopsis thaliana (sp|f4i2j8|catin_arath : 708.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR018816 Cactin_central 174 371
IPR019134 Cactin_C 521 645
No external refs found!