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Aliases : AtHPR1, AtTHO1, THO1, HPR1
Description : component *(THOC1/HPR1) of mRNP trafficking THO subcomplex & original description: none
Gene families : OG0005828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g09998 | |
| Cluster | HCCA: Cluster_184 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g08106 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0252.g060313 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g27882 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z091900.1 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g695300 | AtHPR1, AtTHO1,... | RNA processing.messenger ribonucleoprotein particle... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g19049 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g00800.1 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002357 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15781 | No alias | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.02 | OrthoFinder output from all 47 species | |
| Smo96989 | AtHPR1, AtTHO1,... | RNA processing.messenger ribonucleoprotein particle... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g096600.4.1 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02017 | AtHPR1, AtTHO1,... | component *(THOC1/HPR1) of mRNP trafficking THO... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000082_P001 | AtHPR1, AtTHO1,... | component THOC1/HPR1 of mRNP trafficking THO subcomplex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021861 | THO_THOC1 | 119 | 521 |
| No external refs found! |