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  5. Dcu_g09395

Dcu_g09395 (emb2184)


Aliases : emb2184

Description : component *(bL31c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g09395
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G75350 emb2184 Ribosomal protein L31 0.06 OrthoFinder output from all 47 species
Als_g09129 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Aob_g33625 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aop_g39319 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0288.g063251 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.01G009700.1 emb2184, Ceric.01G009700 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre08.g365400 emb2184 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dde_g22510 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g22754 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01009748001 emb2184 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
LOC_Os01g44210.1 emb2184, LOC_Os01g44210 component psRPL31 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g07156 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Lfl_g27173 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10430444g0010 emb2184 component psRPL31 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp7g17190.1 emb2184 component psRPL31 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Msp_g00799 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c4_22510V3.1 emb2184, Pp3c4_22510 Ribosomal protein L31 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013860 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g46806 No alias component *(bL31c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Sam_g46807 No alias component *(bL31c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc04g080630.4.1 emb2184, Solyc04g080630 component psRPL31 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g16064 emb2184 component *(bL31c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e020389_P001 emb2184, Zm00001e020389 component psRPL31 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002150 Ribosomal_L31 56 120
No external refs found!