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  5. Dcu_g08939

Dcu_g08939 (EMB86, EMB1030, EMB263)


Aliases : EMB86, EMB1030, EMB263

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08939

Target Alias Description ECC score Gene Family Method Actions
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.05 OrthoFinder output from all 47 species
Adi_g107925 ACD, ALATS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g15227 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ala_g13265 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Als_g05106 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Aob_g06066 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Aop_g08353 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12706.t1 EMB86, EMB1030,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g368900 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dac_g09278 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g10945 ACD, ALATS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g11577 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g20259 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023918001 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Gb_36215 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.04 OrthoFinder output from all 47 species
LOC_Os06g13660.1 EMB86, EMB1030,... alanine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Len_g17359 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Lfl_g12875 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
MA_10282308g0010 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Nbi_g27544 ACD, ALATS EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Pnu_g26458 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017335 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g26484 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g111990.3.1 EMB86, EMB1030,... alanine-tRNA ligase 0.06 OrthoFinder output from all 47 species
Spa_g39932 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Zm00001e036036_P002 EMB86, EMB1030,... alanine-tRNA ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018164 Ala-tRNA-synth_IIc_N 101 666
IPR012947 tRNA_SAD 765 808
IPR003156 DHHA1_dom 845 986
No external refs found!