Dcu_g08714


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g08714

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00204910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19191,... 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00045930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
AT3G26540 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G62890 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23848 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35879 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07067 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18398 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19294 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54924 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03193 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03749 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene12038.t1 Aspi01Gene12038 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60948.t1 OTP84, Aspi01Gene60948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G044500.1 Ceric.02G044500 not classified & original description: pacid=50585717... 0.04 OrthoFinder output from all 47 species
Ceric.04G010500.1 Ceric.04G010500 not classified & original description: pacid=50631555... 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.04 OrthoFinder output from all 47 species
Ceric.12G029700.1 Ceric.12G029700 not classified & original description: pacid=50601859... 0.04 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.04 OrthoFinder output from all 47 species
Ceric.30G029200.1 Ceric.30G029200 not classified & original description: pacid=50608909... 0.04 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.04 OrthoFinder output from all 47 species
Ceric.38G046100.1 Ceric.38G046100 not classified & original description: pacid=50579564... 0.04 OrthoFinder output from all 47 species
Ceric.39G043600.1 Ceric.39G043600 not classified & original description: pacid=50582616... 0.06 OrthoFinder output from all 47 species
Dac_g19063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36042 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43291 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g24310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28079 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20585 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
LOC_Os06g30940.1 LOC_Os06g30940 Pentatricopeptide repeat-containing protein At3g53360,... 0.04 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.05 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10257685g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_112066g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_117676g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_140208g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_14659g0010 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
MA_483636g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_59148g0010 CRR22 RNA editing factor (MEF11) 0.02 OrthoFinder output from all 47 species
MA_75512g0010 DOT4 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g02471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47208 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g03163 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20192 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g24067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25337 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39566 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06477 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30421 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019261 No alias not classified & original description: CDS=1-3048 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023499 No alias not classified & original description: CDS=1-1593 0.04 OrthoFinder output from all 47 species
Sam_g07204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo110549 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo117311 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo88255 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc01g081110.4.1 SLO1, Solyc01g081110 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.04 OrthoFinder output from all 47 species
Solyc02g065560.1.1 Solyc02g065560 Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.04 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc06g084580.1.1 Solyc06g084580 Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
Solyc07g055310.1.1 Solyc07g055310 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc09g082170.4.1 Solyc09g082170 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.02 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Solyc11g066920.1.1 CRR28, Solyc11g066920 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.05 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.02 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10389 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32773 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g53071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05539 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35660 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Zm00001e011748_P001 LPA66, Zm00001e011748 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Zm00001e011923_P001 Zm00001e011923 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 136 158
IPR002885 Pentatricopeptide_repeat 59 106
No external refs found!