Dcu_g08200

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g08200
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00111720	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00014p00241930	BCS1,...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00215810	evm_27.TU.AmTr_v1...	AAA-ATPase At5g57480 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00244830	AATP1,...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT1G43910	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
Als_g42032	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17832	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0349.g066532	No alias	not classified & original description: CDS=1-1605	0.03	OrthoFinder output from all 47 species
Dac_g30278	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g34932	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g23306	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_27546	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os03g02330.1	LOC_Os03g02330	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os05g51130.1	BCS1, LOC_Os05g51130	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os06g48240.1	LOC_Os06g48240	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g24320.1	AATP1, LOC_Os12g24320	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28137.1	AATP1, LOC_Os12g28137	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28177.1	AATP1, LOC_Os12g28177	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g15160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10285593g0010	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10435321g0020	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10436428g0010	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_161279g0020	No alias	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_23842g0010	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_296237g0020	BCS1	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Msp_g10792	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g23101	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo413949	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc05g015060.4.1	Solyc05g015060	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc12g055810.1.1	Solyc12g055810	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Spa_g11504	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10080	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e027961_P001	Zm00001e027961	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	247	383
IPR025753	AAA_N_dom	30	122

External Links

No external refs found!

Dcu_g08200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation