Dcu_g07979 (SAR1, ATSAR1B,...)

Aliases : SAR1, ATSAR1B, ATSAR1, SAR1B, ATSARA1B

Description : small GTPase *(Sar1) & original description: none

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g07979
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
Als_g10072	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001299.13	SAR1, ATSAR1B,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.01	OrthoFinder output from all 47 species
Cre11.g468300	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	OrthoFinder output from all 47 species
LOC_Os01g15010.1	SAR2, ATSARA1C,...	GTPase (Sar1)	0.05	OrthoFinder output from all 47 species
Len_g02610	No alias	small GTPase *(Sar1) & original description: none	0.05	OrthoFinder output from all 47 species
Smo179259	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.07	OrthoFinder output from all 47 species
Solyc01g079535.1.1	SAR2, ATSARA1C,...	GTPase (Sar1)	0.05	OrthoFinder output from all 47 species
Tin_g00586	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017591_P001	SAR2, ATSARA1C,...	GTPase (Sar1)	0.12	OrthoFinder output from all 47 species
Zm00001e026263_P001	SAR2, ATSARA1C,...	GTPase (Sar1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	8	192

External Links

No external refs found!