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  5. Dcu_g07677

Dcu_g07677 (RAP2.2)


Aliases : RAP2.2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g07677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00051610 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G11020 DREB2B, DREB2 DRE/CRT-binding protein 2B 0.02 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.03 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G25190 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g074655 HRD subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g08370 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g07015 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aob_g17354 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60667.t1 TINY2, Aspi01Gene60667 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g08739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G022000.1 RAP2.12, Ceric.08G022000 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Cre08.g364400 RAP2.2 No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_36010 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39590.3 LOC_Os05g39590 Dehydration-responsive element-binding protein 2D... 0.03 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_937270g0010 ERF2, ATERF2, ATERF-2 Ethylene-responsive transcription factor 1A... 0.04 OrthoFinder output from all 47 species
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Mp7g13760.1 RAP2.4 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Nbi_g11606 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Nbi_g24059 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g40868 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42920 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c16_13260V3.1 Pp3c16_13260 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_820V3.1 Pp3c5_820 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.03 OrthoFinder output from all 47 species
Solyc02g093130.3.1 DEAR3, Solyc02g093130 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc09g089920.1.1 Solyc09g089920 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Spa_g22183 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007332_P001 Zm00001e007332 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e016421_P001 CRF4, Zm00001e016421 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 141 189
No external refs found!