Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G16480 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT1G74600 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G16835 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g036452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g069068 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g099297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g101108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g09630 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g18790 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g08796 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g20705 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene34799.t1 | Aspi01Gene34799 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0005.g009229 | No alias | not classified & original description: CDS=1-2601 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0021.g015639 | No alias | not classified & original description: CDS=1-1713 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016150 | No alias | not classified & original description: CDS=1-2547 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0028.g023799 | No alias | not classified & original description: CDS=1-1911 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0035.g025724 | No alias | not classified & original description: CDS=1-3840 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0036.g025743 | No alias | not classified & original description: CDS=1-2553 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0104.g044765 | No alias | not classified & original description: CDS=1-2373 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0106.g045082 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=1-2640 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0127.g048736 | No alias | not classified & original description: CDS=1-3153 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0128.g048744 | No alias | not classified & original description: CDS=1-2109 | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0171.g055669 | No alias | not classified & original description: CDS=1-2286 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0332.g065427 | No alias | not classified & original description: CDS=1-3180 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0373.g067166 | No alias | not classified & original description: CDS=1-2166 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0880.g091024 | No alias | not classified & original description: CDS=182-3622 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g75137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G031300.1 | Ceric.01G031300 | not classified & original description: pacid=50591599... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G081200.1 | Ceric.11G081200 | not classified & original description: pacid=50594979... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.18G077200.1 | Ceric.18G077200 | not classified & original description: pacid=50621761... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G026700.1 | Ceric.28G026700 | not classified & original description: pacid=50570188... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g05661 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06448 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g17233 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g50973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g15906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46744 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025574001 | No alias | Pentatricopeptide repeat-containing protein At2g37320... | 0.03 | OrthoFinder output from all 47 species | |
Len_g18942 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g44786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g07749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_77675g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g07777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g17296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20793 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g36408 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08797 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g16519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g31332 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g63843 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g22251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g30547 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g53728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g60357 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0125.g021689 | No alias | S-adenosyl methionine transporter *(GOSAMT) & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g05175 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g13631 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g24307 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g055310.1.1 | Solyc07g055310 | Pentatricopeptide repeat-containing protein At2g41080... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g007230.1.1 | Solyc11g007230 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g067210.1.1 | Solyc11g067210 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008200_P001 | Zm00001e008200 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | HCCA |
MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
MF | GO:0009029 | tetraacyldisaccharide 4'-kinase activity | IEP | HCCA |
BP | GO:0009245 | lipid A biosynthetic process | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
BP | GO:0046493 | lipid A metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | HCCA |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 308 | 337 |
IPR002885 | Pentatricopeptide_repeat | 280 | 307 |
IPR002885 | Pentatricopeptide_repeat | 405 | 454 |
IPR046848 | E_motif | 726 | 788 |
IPR002885 | Pentatricopeptide_repeat | 103 | 151 |
IPR002885 | Pentatricopeptide_repeat | 508 | 554 |
IPR002885 | Pentatricopeptide_repeat | 608 | 656 |
IPR002885 | Pentatricopeptide_repeat | 204 | 251 |
No external refs found! |