Dcu_g06924 (RAD23B, RAD23)


Aliases : RAD23B, RAD23

Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none


Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06924
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
Als_g42278 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.05 OrthoFinder output from all 47 species
Als_g51273 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01011907001 RAD23-3, RAD23C Ubiquitin receptor RAD23c OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os08g33340.1 RAD23D, LOC_Os08g33340 shuttle protein (RAD23) 0.03 OrthoFinder output from all 47 species
Mp1g26290.1 RAD23B, RAD23 shuttle protein (RAD23) 0.04 OrthoFinder output from all 47 species
Nbi_g04293 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.04 OrthoFinder output from all 47 species
Ore_g27319 RAD23-3, RAD23C ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Pir_g08671 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015747 RAD23D ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.04 OrthoFinder output from all 47 species
Smo77427 RAD23B, RAD23 Ubiquitin receptor RAD23b OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Spa_g18087 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Tin_g30534 RAD23B, RAD23 ubiquiTin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 76
IPR015360 XPC-bd 294 349
IPR015940 UBA 376 411
IPR015940 UBA 157 194
No external refs found!