Aliases : RAD23B, RAD23
Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none
Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g06924 | |
Cluster | HCCA: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g42278 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.05 | OrthoFinder output from all 47 species | |
Als_g51273 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01011907001 | RAD23-3, RAD23C | Ubiquitin receptor RAD23c OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g33340.1 | RAD23D, LOC_Os08g33340 | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g26290.1 | RAD23B, RAD23 | shuttle protein (RAD23) | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g04293 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g27319 | RAD23-3, RAD23C | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08671 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0063.g015747 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.04 | OrthoFinder output from all 47 species | |
Smo77427 | RAD23B, RAD23 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
Spa_g18087 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30534 | RAD23B, RAD23 | ubiquiTin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
No external refs found! |