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  5. Dcu_g06823

Dcu_g06823 (VAP27, VAP27-1, (AT)VAP, VAP)


Aliases : VAP27, VAP27-1, (AT)VAP, VAP

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06823

Target Alias Description ECC score Gene Family Method Actions
Cba_g21723 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01027683001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os05g30950.1 VAP27-2, LOC_Os05g30950 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g05890.1 LOC_Os08g05890 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
Len_g03669 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Len_g17263 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Mp3g04340.1 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g007200.4.1 Solyc08g007200 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc08g078000.3.1 Solyc08g078000 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e021734_P002 PVA12, Zm00001e021734 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e040240_P001 Zm00001e040240 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 109
No external refs found!