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  5. Dcu_g06515

Dcu_g06515


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g06515
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00099010 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G05430 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.05 OrthoFinder output from all 47 species
Ceric.04G012100.1 Ceric.04G012100 not classified & original description: pacid=50630823... 0.03 OrthoFinder output from all 47 species
Ceric.04G099500.1 Ceric.04G099500 not classified & original description: pacid=50631612... 0.08 OrthoFinder output from all 47 species
Ceric.24G040200.1 Ceric.24G040200 not classified & original description: pacid=50630010... 0.03 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g20479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g33929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02506 No alias EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001848 No alias not classified & original description: CDS=1-3909 0.04 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g086750.3.1 Solyc02g086750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 336 418
No external refs found!