Dcu_g06401 (MCM5)

Aliases : MCM5

Description : component *(MCM5) of MCM replicative DNA helicase complex & original description: none

Gene families : OG0006960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006960_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g06401

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00049360	MCM5,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.06	OrthoFinder output from all 47 species
AT2G07690	MCM5	Minichromosome maintenance (MCM2/3/5) family protein	0.13	OrthoFinder output from all 47 species
Adi_g055718	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.02	OrthoFinder output from all 47 species
Ala_g32000	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Als_g01075	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Aop_g14370	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.16	OrthoFinder output from all 47 species
Aspi01Gene34859.t1	MCM5, Aspi01Gene34859	component *(MCM5) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Azfi_s0083.g038881	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.18	OrthoFinder output from all 47 species
Ceric.25G009500.1	MCM5, Ceric.25G009500	component *(MCM5) of MCM replicative DNA helicase...	0.28	OrthoFinder output from all 47 species
Cre01.g023150	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.04	OrthoFinder output from all 47 species
Dac_g15442	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
GSVIVT01001046001	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.09	OrthoFinder output from all 47 species
Gb_09107	MCM5	DNA replication licensing factor MCM5 OS=Oryza sativa...	0.07	OrthoFinder output from all 47 species
LOC_Os02g55410.1	MCM5, LOC_Os02g55410	component MCM5 of MCM replicative DNA helicase complex	0.15	OrthoFinder output from all 47 species
Len_g03362	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Lfl_g19529	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
MA_10426777g0010	MCM5	component MCM5 of MCM replicative DNA helicase complex	0.2	OrthoFinder output from all 47 species
Mp3g08120.1	MCM5	component MCM5 of MCM replicative DNA helicase complex	0.17	OrthoFinder output from all 47 species
Msp_g01667	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Nbi_g01162	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ppi_g03897	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.09	OrthoFinder output from all 47 species
Sam_g09702	No alias	component *(MCM5) of MCM replicative DNA helicase...	0.15	OrthoFinder output from all 47 species
Smo88878	MCM5	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.04	OrthoFinder output from all 47 species
Solyc07g005020.3.1	MCM5, Solyc07g005020	component MCM5 of MCM replicative DNA helicase complex	0.08	OrthoFinder output from all 47 species
Spa_g08592	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Spa_g08593	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Tin_g06768	MCM5	component *(MCM5) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Zm00001e016127_P001	MCM5, Zm00001e016127	component MCM5 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
Zm00001e023682_P001	MCM5, Zm00001e023682	DNA replication licensing factor MCM5 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001208	MCM_dom	315	535
IPR027925	MCM_N	33	121
IPR041562	MCM_lid	553	642
IPR033762	MCM_OB	135	270

External Links

No external refs found!

Dcu_g06401 (MCM5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation