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  5. Dcu_g05676

Dcu_g05676 (VFB4, SKIP2)


Aliases : VFB4, SKIP2

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dcu_g05676

Target Alias Description ECC score Gene Family Method Actions
AT4G07400 VFB3 VIER F-box proteine 3 0.03 OrthoFinder output from all 47 species
Adi_g089174 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0312.g064187 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G012600.1 VFB3, Ceric.19G012600 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g21960 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42670.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Nbi_g05363 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g06156 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc02g092990.1.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 60 92
IPR001611 Leu-rich_rpt 326 350
IPR001611 Leu-rich_rpt 148 169
IPR001611 Leu-rich_rpt 403 426
No external refs found!