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  5. Dcu_g05447

Dcu_g05447


Description : VPS23-interacting protein *(SH3P2) & original description: none


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g05447

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270050 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.06 OrthoFinder output from all 47 species
Als_g13200 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02848 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030683 No alias VPS23-interacting protein *(SH3P2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G050300.1 Ceric.17G050300 VPS23-interacting protein *(SH3P2) & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G061500.1 Ceric.27G061500 not classified & original description: pacid=50605318... 0.03 OrthoFinder output from all 47 species
Ceric.36G017400.1 Ceric.36G017400 VPS23-interacting protein *(SH3P2) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021367001 No alias SH3 domain-containing protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01024196001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
Gb_05415 No alias SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_05416 No alias SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g32460.1 LOC_Os07g32460 SH3 domain-containing protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g36870.1 LOC_Os10g36870 VPS23-interacting protein (SH3P2) 0.09 OrthoFinder output from all 47 species
Lfl_g03050 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430197g0010 No alias VPS23-interacting protein (SH3P2) 0.02 OrthoFinder output from all 47 species
Msp_g12340 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10115 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002516 No alias VPS23-interacting protein *(SH3P2) & original... 0.03 OrthoFinder output from all 47 species
Smo164821 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 OrthoFinder output from all 47 species
Solyc01g110300.4.1 Solyc01g110300 VPS23-interacting protein (SH3P2) 0.02 OrthoFinder output from all 47 species
Solyc02g071330.4.1 Solyc02g071330 SH3 domain-containing protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g05159 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004375_P001 Zm00001e004375 VPS23-interacting protein (SH3P2) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000145 exocyst IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 312 357
No external refs found!