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  5. Dcu_g04887

Dcu_g04887 (SIP1)


Aliases : SIP1

Description : raffinose synthase & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04887

Target Alias Description ECC score Gene Family Method Actions
Cba_g38980 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02833 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015589001 DIN10 Probable galactinol--sucrose galactosyltransferase 6... 0.02 OrthoFinder output from all 47 species
Zm00001e033100_P002 SIP2, AtSIP2,... raffinose alpha-galactosidase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 25 790
No external refs found!