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  5. Dcu_g04874

Dcu_g04874


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04874
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00055400 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g12576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo122991 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g098250.4.1 Solyc01g098250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g007280.4.1 Solyc03g007280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022589_P001 Zm00001e022589 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 516 714
IPR001623 DnaJ_domain 67 128
No external refs found!