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  5. Dcu_g04468

Dcu_g04468 (PVA12)


Aliases : PVA12

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04468

Target Alias Description ECC score Gene Family Method Actions
AT1G08820 VAP27-2 vamp/synaptobrevin-associated protein 27-2 0.04 OrthoFinder output from all 47 species
AT3G60600 VAP27, VAP27-1,... vesicle associated protein 0.03 OrthoFinder output from all 47 species
Ehy_g10290 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Gb_28560 No alias contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
LOC_Os02g44300.1 LOC_Os02g44300 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
LOC_Os08g05890.1 LOC_Os08g05890 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Spa_g06544 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e014355_P001 Zm00001e014355 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 108
No external refs found!