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  5. Dcu_g04140

Dcu_g04140 (SECA2)


Aliases : SECA2

Description : component *(SecA2) of inner envelope Sec2 post-import insertion system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04140
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008813001 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.04 OrthoFinder output from all 47 species
LOC_Os11g08980.1 SECA2, LOC_Os11g08980 Protein translocase subunit SECA2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g10903 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Pnu_g06676 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Sam_g16150 No alias component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Smo176627 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011116 SecA_Wing/Scaffold 780 1055
IPR011130 SecA_preprotein_X-link_dom 317 417
IPR011115 SecA_DEAD 93 460
No external refs found!