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  5. Dcu_g04024

Dcu_g04024 (SUVH5, SGD9)


Aliases : SUVH5, SGD9

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g04024

Target Alias Description ECC score Gene Family Method Actions
Cba_g05945 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.02G055100.1 SUVH1, Ceric.02G055100 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ceric.13G009600.1 SUVH3, SDG19,... EC_2.1 transferase transferring one-carbon group &... 0.06 OrthoFinder output from all 47 species
Ceric.13G012400.1 SDG23, SUVH6,... not classified & original description: pacid=50636550... 0.06 OrthoFinder output from all 47 species
Ceric.32G043200.1 SUVH1, Ceric.32G043200 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01027942001 ATSUVH2, SDG3, SUVH2 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Gb_09748 SUVH1 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Gb_40999 SUVH1 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
LOC_Os01g59620.1 SUVH1, LOC_Os01g59620 class V/Su(var) histone methyltransferase component of... 0.04 OrthoFinder output from all 47 species
Len_g19979 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g17339 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Pir_g19950 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015556 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Solyc03g093700.3.1 SDG23, SUVH6,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Solyc09g090810.3.1 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Spa_g15701 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e003855_P002 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 552 651
IPR003105 SRA_YDG 370 522
IPR001214 SET_dom 670 803
No external refs found!