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  5. Dcu_g03993

Dcu_g03993


Description : not classified & original description: none


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03993
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00160930 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.04 OrthoFinder output from all 47 species
Adi_g014921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14795 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0225.g058906 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Cba_g32677 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Ceric.02G080400.1 Ceric.02G080400 not classified & original description: pacid=50584965... 0.05 OrthoFinder output from all 47 species
Ehy_g01355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g70320.1 LOC_Os01g70320 SCD2 component of post-Golgi trafficking SCD complex 0.13 OrthoFinder output from all 47 species
LOC_Os11g31950.1 LOC_Os11g31950 SCD2 component of post-Golgi trafficking SCD complex 0.02 OrthoFinder output from all 47 species
Len_g58694 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Pir_g02262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009985 No alias not classified & original description: CDS=162-1658 0.03 OrthoFinder output from all 47 species
Smo438807 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.08 OrthoFinder output from all 47 species
Solyc03g118390.3.1 Solyc03g118390 SCD2 component of post-Golgi trafficking SCD complex 0.03 OrthoFinder output from all 47 species
Solyc05g023770.4.1 Solyc05g023770 Coiled-coil domain-containing protein SCD2... 0.03 OrthoFinder output from all 47 species
Tin_g03385 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e018754_P001 Zm00001e018754 SCD2 component of post-Golgi trafficking SCD complex 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!