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  5. Dcu_g03915

Dcu_g03915


Description : GARP subgroup HHO transcription factor & original description: none


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03915

Target Alias Description ECC score Gene Family Method Actions
AT1G13300 HRS1 myb-like transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g030747 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g21951 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29176.t1 Aspi01Gene29176 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47868.t1 Aspi01Gene47868 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g25602 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G045700.1 Ceric.21G045700 GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Lfl_g03168 No alias GARP subgroup HHO transcription factor & original... 0.08 OrthoFinder output from all 47 species
Msp_g25323 No alias GARP subgroup HHO transcription factor & original... 0.07 OrthoFinder output from all 47 species
Sam_g29341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g37435 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Tin_g11367 No alias GARP subgroup HHO transcription factor & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 277 328
No external refs found!