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  5. Dcu_g03700

Dcu_g03700 (ARA-1, ATRABA5E,...)


Aliases : ARA-1, ATRABA5E, RABA5E, ATRAB11D, ARA

Description : not classified & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g03700
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 AtRABA6b,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AT1G73640 RABA6a, AtRABA6a RAB GTPase homolog A6A 0.04 OrthoFinder output from all 47 species
Aev_g04605 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g31350 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g00731 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06019 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20651 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g01612 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22467 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29497.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G031600.1 ATRABA5C, ARA4,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g27746 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021253001 ATHSGBP, RABA1d,... Vesicle trafficking.regulation of membrane tethering and... 0.05 OrthoFinder output from all 47 species
GSVIVT01023225001 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
LOC_Os01g54590.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os05g20050.1 RAB-A2C,... A-class RAB GTPase 0.09 OrthoFinder output from all 47 species
LOC_Os05g44070.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os08g41340.1 AtRABA5d,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Len_g16053 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g00730.1 ATRABA5C, ARA4,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Msp_g05544 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36456 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04295 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15960 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27361 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17396 No alias A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Smo146310 AtRABA1f, RABA1f Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Smo158820 AtRABA1f, RABA1f Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Smo442026 ATRABA5C, ARA4,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Solyc09g098170.4.1 AtRABA5d,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc10g045550.2.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g07579 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14805 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04947 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27440 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e020213_P001 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e027669_P001 ATRABA2A,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e032148_P001 ATRABA1B, RAB11,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 137 201
IPR001806 Small_GTPase 10 110
No external refs found!