Dcu_g03219 (BTAF1, RGD3, CHA16,...)

Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none

Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g03219

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00235730	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.02	OrthoFinder output from all 47 species
AT3G54280	BTAF1, RGD3,...	DNA binding;ATP binding;nucleic acid...	0.06	OrthoFinder output from all 47 species
Aev_g04198	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Ala_g12502	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Als_g16472	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.09	OrthoFinder output from all 47 species
Aob_g12460	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
Aop_g70865	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Ceric.27G041200.1	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.05	OrthoFinder output from all 47 species
Cre16.g687301	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
Dde_g14787	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Ehy_g09279	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01019359001	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.08	OrthoFinder output from all 47 species
Gb_19667	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.04	OrthoFinder output from all 47 species
LOC_Os02g06592.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.02	OrthoFinder output from all 47 species
Lfl_g35777	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.1	OrthoFinder output from all 47 species
MA_10430482g0010	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.03	OrthoFinder output from all 47 species
MA_10431148g0010	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.06	OrthoFinder output from all 47 species
MA_79681g0010	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.06	OrthoFinder output from all 47 species
Ore_g19191	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Pir_g09833	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.03	OrthoFinder output from all 47 species
Sam_g29302	No alias	TATA box-binding protein-associated factor *(MOT1) &...	0.04	OrthoFinder output from all 47 species
Smo186944	BTAF1, RGD3,...	RNA biosynthesis.RNA polymerase II-dependent...	0.05	OrthoFinder output from all 47 species
Solyc08g074500.2.1	BTAF1, RGD3,...	chromatin remodeling factor (Mot1). TATA box-binding...	0.05	OrthoFinder output from all 47 species
Solyc08g074510.1.1	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.04	OrthoFinder output from all 47 species
Solyc08g074520.2.1	BTAF1, RGD3,...	TATA-binding protein-associated factor BTAF1...	0.05	OrthoFinder output from all 47 species
Spa_g08445	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.08	OrthoFinder output from all 47 species
Tin_g13188	BTAF1, RGD3,...	TATA box-binding protein-associated factor *(MOT1) &...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0030527	structural constituent of chromatin	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	1482	1779
IPR022707	Mot1_central_dom	783	1245
IPR001650	Helicase_C	1844	1945

External Links

No external refs found!

Dcu_g03219 (BTAF1, RGD3, CHA16,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation