Dcu_g03145 (UBP18)

Aliases : UBP18

Description : deubiquitinase *(UBP15-21) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g03145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00205690	UBP23,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AMTR_s00096p00170210	UBP15,...	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
AMTR_s00135p00021060	UBP16,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AT3G14400	UBP25	ubiquitin-specific protease 25	0.04	OrthoFinder output from all 47 species
AT5G57990	UBP23	ubiquitin-specific protease 23	0.02	OrthoFinder output from all 47 species
Adi_g013898	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077157	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g30011	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08916	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g01298	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14993	UBP23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10800	UBP23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01001912001	UBP23	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
GSVIVT01009158001	UBP16	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01014079001	UBP23	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
GSVIVT01033166001	UBP18	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os02g14730.1	UBP15, LOC_Os02g14730	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Len_g01378	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g45877	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09709	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g11163	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_132593g0020	UBP23	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Mp3g16110.1	UBP23	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Ore_g09620	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29641	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g24151	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g15722	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05909	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g08769	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo420048	UBP18	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Solyc04g076210.3.1	UBP16, Solyc04g076210	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e003832_P001	UBP17, Zm00001e003832	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Zm00001e027381_P003	UBP25, Zm00001e027381	deubiquitinase (UBP25)	0.02	OrthoFinder output from all 47 species
Zm00001e032099_P001	UBP25, Zm00001e032099	deubiquitinase (UBP25)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002893	Znf_MYND	115	152
IPR001394	Peptidase_C19_UCH	240	543

External Links

No external refs found!

Dcu_g03145 (UBP18)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation