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Description : not classified & original description: none
Gene families : OG0001892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g03112 | |
| Cluster | HCCA: Cluster_170 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g17030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g21015 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g62266 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene05465.t1 | Aspi01Gene05465 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene25462.t1 | Aspi01Gene25462 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0868.g090466 | No alias | not classified & original description: CDS=249-2462 | 0.04 | OrthoFinder output from all 47 species | |
| Len_g22878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g07304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13771 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000721_P001 | Zm00001e000721 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014989_P002 | Zm00001e014989 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022860_P001 | Zm00001e022860 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | HCCA |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |