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  5. Dcu_g02964

Dcu_g02964


Description : subunit theta *(CCT8) of CCT chaperonin folding complex & original description: none


Gene families : OG0006803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02964
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00079950 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from all 47 species
Adi_g077191 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ala_g08900 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Als_g08346 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Aop_g12393 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030085 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Ceric.23G020400.1 Ceric.23G020400 subunit theta *(CCT8) of CCT chaperonin folding complex... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 OrthoFinder output from all 47 species
Dac_g02248 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
LOC_Os03g59020.1 LOC_Os03g59020 CCT8 subunit theta of CCT chaperonin folding complex 0.13 OrthoFinder output from all 47 species
Lfl_g06112 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Nbi_g02282 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ore_g16783 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Pir_g00611 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ppi_g15696 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Sam_g19951 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Smo143104 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Solyc01g088080.3.1 Solyc01g088080 CCT8 subunit theta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Spa_g04596 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.08 OrthoFinder output from all 47 species
Spa_g42414 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Spa_g56213 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.11 OrthoFinder output from all 47 species
Tin_g01051 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Zm00001e011242_P002 Zm00001e011242 CCT8 subunit theta of CCT chaperonin folding complex 0.11 OrthoFinder output from all 47 species
Zm00001e024443_P002 Zm00001e024443 CCT8 subunit theta of CCT chaperonin folding complex 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 38 528
No external refs found!