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  5. Dcu_g02462

Dcu_g02462 (CCB1)


Aliases : CCB1

Description : assembly factor CCB1 of CCB cytochrome b6 maturation system (system IV) & original description: none


Gene families : OG0006907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g02462

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00074040 CCB1,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
AT3G26710 CCB1 cofactor assembly of complex C 0.07 OrthoFinder output from all 47 species
Adi_g015559 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Adi_g089508 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Aev_g08263 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Ala_g12011 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Als_g54717 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Aob_g20691 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Aop_g06853 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.1 OrthoFinder output from all 47 species
Azfi_s0436.g069940 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Cba_g10743 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Ceric.22G072900.1 CCB1, Ceric.22G072900 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Cre16.g662150 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 OrthoFinder output from all 47 species
Dac_g22896 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Dde_g16667 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Ehy_g22554 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
GSVIVT01032980001 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.09 OrthoFinder output from all 47 species
Gb_25718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32320.1 CCB1, LOC_Os11g32320 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Len_g01063 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Lfl_g35581 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.09 OrthoFinder output from all 47 species
MA_10429833g0010 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Mp4g15480.1 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g14152 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Ore_g11194 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Pir_g15644 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Pnu_g07222 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Ppi_g30079 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009830 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Sam_g18985 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Sam_g18986 No alias assembly factor CCB1 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Smo99402 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Spa_g05565 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.07 OrthoFinder output from all 47 species
Tin_g24718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021919 CCB1 97 266
No external refs found!