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  5. Dcu_g01950

Dcu_g01950


Description : LRR-domain extensin & original description: none


Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01950

Target Alias Description ECC score Gene Family Method Actions
AT4G04980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Ceric.16G012800.1 Ceric.16G012800 not classified & original description: pacid=50590071... 0.03 OrthoFinder output from all 47 species
GSVIVT01007119001 No alias Uncharacterized protein At4g04980 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Msp_g31435 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078660.4.1 Solyc02g078660 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e023658_P001 Zm00001e023658 Uncharacterized protein At4g04980 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 100 134
IPR001611 Leu-rich_rpt 288 347
IPR001611 Leu-rich_rpt 170 227
No external refs found!