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  5. Dcu_g01928

Dcu_g01928 (EDL2)


Aliases : EDL2

Description : substrate adaptor EDL of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g01928
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269360 EDL3,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G63060 EDL3 EID1-like 3 0.04 OrthoFinder output from all 47 species
Ala_g09464 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.05 OrthoFinder output from all 47 species
Azfi_s0090.g042764 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.01 OrthoFinder output from all 47 species
GSVIVT01011098001 EDL3 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g58850.1 EDL3, LOC_Os01g58850 component EDL of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
LOC_Os05g41490.1 EDL3, LOC_Os05g41490 component EDL of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Lfl_g04726 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.03 OrthoFinder output from all 47 species
Msp_g06818 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.05 OrthoFinder output from all 47 species
Solyc06g084320.1.1 EDL3, Solyc06g084320 component EDL of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Solyc09g064820.1.1 EDL3, Solyc09g064820 component EDL of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e019541_P001 EDL3, Zm00001e019541 component EDL of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!