Dcu_g00736 (EIF4E, CUM1, AT.EIF4E1, eIF4E1)

Aliases : EIF4E, CUM1, AT.EIF4E1, eIF4E1

Description : component *(eIF-iso4E) of eIF-iso4F unwinding complex & original description: none

Gene families : OG0001969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g00736
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00231660	EIF4E, CUM1,...	Protein biosynthesis.translation initiation.mRNA...	0.04	OrthoFinder output from all 47 species
AT5G35620	LSP, LSP1,...	Eukaryotic initiation factor 4E protein	0.02	OrthoFinder output from all 47 species
Cre03.g199900	EIF4E, CUM1,...	Eukaryotic translation initiation factor 4E-1...	0.02	OrthoFinder output from all 47 species
Tin_g01493	EIF4E, CUM1,...	component *(eIF4E) of eIF4F mRNA unwinding complex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001040	TIF_eIF_4E	74	228

External Links

No external refs found!