Dcu_g00674 (HCF106)

Aliases : HCF106

Description : component *(cpTatB) of thylakoid membrane Tat translocation system & original description: none

Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g00674

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013959	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Aev_g42933	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Ala_g07834	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Aob_g02696	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.05	OrthoFinder output from all 47 species
Aspi01Gene06021.t1	HCF106, Aspi01Gene06021	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Ceric.39G008300.1	HCF106, Ceric.39G008300	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Cre08.g371650	HCF106	Protein translocation.chloroplast.thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Dde_g06214	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.08	OrthoFinder output from all 47 species
GSVIVT01028894001	HCF106	Protein translocation.chloroplast.thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
LOC_Os11g37130.1	HCF106, LOC_Os11g37130	HCF106 protein involved in PS-II assembly. component...	0.04	OrthoFinder output from all 47 species
Len_g14600	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.05	OrthoFinder output from all 47 species
Lfl_g30372	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.05	OrthoFinder output from all 47 species
MA_919815g0010	HCF106	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Mp8g12830.1	HCF106	HCF106 protein involved in PS-II assembly. component...	0.05	OrthoFinder output from all 47 species
Ore_g13537	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.04	OrthoFinder output from all 47 species
Pir_g11584	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Pnu_g25885	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004868	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.02	OrthoFinder output from all 47 species
Sam_g08783	No alias	component *(cpTatB) of thylakoid membrane Tat...	0.03	OrthoFinder output from all 47 species
Solyc03g025310.3.1	HCF106, Solyc03g025310	HCF106 protein involved in PS-II assembly. component...	0.04	OrthoFinder output from all 47 species
Spa_g11354	HCF106	component *(cpTatB) of thylakoid membrane Tat...	0.06	OrthoFinder output from all 47 species
Zm00001e008326_P002	HCF106, Zm00001e008326	HCF106 protein involved in PS-II assembly. component...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0110102	ribulose bisphosphate carboxylase complex assembly	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003369	TatA/B/E	76	123

External Links

No external refs found!

Dcu_g00674 (HCF106)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation