Dcu_g00588

Description : regulatory factor *(NRT3) of nitrate uptake system & original description: none

Gene families : OG0001863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001863_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g00588
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00207930	ATNRT3.1,...	Nutrient uptake.nitrogen assimilation.nitrate uptake...	0.02	OrthoFinder output from all 47 species
AT5G50200	ATNRT3.1, NRT3.1, WR3	nitrate transmembrane transporters	0.03	OrthoFinder output from all 47 species
Aop_g13467	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
Aop_g31635	ATNRT3.1, NRT3.1, WR3	regulatory factor *(NRT3) of nitrate uptake system &...	0.03	OrthoFinder output from all 47 species
LOC_Os02g38230.1	ATNRT3.1,...	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
MA_108756g0010	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
MA_11774g0010	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
Mp4g22660.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Mp4g22730.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Mp4g22750.1	ATNRT3.1, NRT3.1, WR3	regulatory factor NRT3 of nitrate uptake system	0.02	OrthoFinder output from all 47 species
Smo227648	ATNRT3.1, NRT3.1, WR3	Nutrient uptake.nitrogen assimilation.nitrate uptake...	0.03	OrthoFinder output from all 47 species
Solyc03g112100.3.1	Solyc03g112100	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species
Zm00001e015013_P001	ATNRT3.1,...	regulatory factor NRT3 of nitrate uptake system	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	IEA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	IEA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016605	Transptr_NO3_Nar2	27	172

External Links

No external refs found!

Dcu_g00588

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation