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  5. Spa_g56968

Spa_g56968


Description : not classified & original description: none


Gene families : OG0000348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56968

Target Alias Description ECC score Gene Family Method Actions
Ala_g22546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g40923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24173.t1 Aspi01Gene24173 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16386 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g29209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_7340V3.1 Pp3c20_7340 No annotation 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR010730 HET 28 80
No external refs found!