Spa_g56931


Description : not classified & original description: none


Gene families : OG0001007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56931
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT2G01580 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Als_g08259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00128.t1 Aspi01Gene00128 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61458.t1 Aspi01Gene61458 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029597001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g01960.1 LOC_Os04g01960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g53923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16523 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g082960.3.1 Solyc06g082960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g51330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 80
No external refs found!