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  5. Spa_g56742

Spa_g56742


Description : not classified & original description: none


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56742

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G41460 No alias Protein of unknown function (DUF604) 0.02 OrthoFinder output from all 47 species
Als_g01135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g015970 No alias not classified & original description: CDS=592-2169 0.03 OrthoFinder output from all 47 species
Cba_g07895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04360 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_25014 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g16356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_66888g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_93259g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g04220.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g30463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo63103 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g052650.2.1 Solyc07g052650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g28723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 249 494
No external refs found!