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  5. Spa_g56388

Spa_g56388


Description : fucosyl transferase (FRB) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0001382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56388

Target Alias Description ECC score Gene Family Method Actions
AT5G01100 No alias O-fucosyltransferase family protein 0.05 OrthoFinder output from all 47 species
Aev_g06079 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ala_g02530 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g10201 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10444.t3 Aspi01Gene10444 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36503.t1 Aspi01Gene36503 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36509.t1 Aspi01Gene36509 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010484 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ceric.31G048900.1 Ceric.31G048900 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g05669 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g13034 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Gb_16031 No alias rhamnosyltransferase 0.07 OrthoFinder output from all 47 species
LOC_Os01g63230.1 LOC_Os01g63230 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g50520 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
MA_5199g0010 No alias rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Mp1g10780.1 No alias rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Msp_g03556 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g11713 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.09 OrthoFinder output from all 47 species
Nbi_g21981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g46300 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020561 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Solyc07g041750.3.1 Solyc07g041750 O-fucosyltransferase 35 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc09g011860.4.1 Solyc09g011860 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 218 532
No external refs found!