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  5. Spa_g56071

Spa_g56071 (LGT1, GAUT1)


Aliases : LGT1, GAUT1

Description : not classified & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g56071

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00192680 GAUT7, LGT7,... Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.04 OrthoFinder output from all 47 species
AMTR_s00115p00091320 LGT6, GAUT12,... Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G25140 GAUT8, QUA1 Nucleotide-diphospho-sugar transferases superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G47780 GAUT4 galacturonosyltransferase 4 0.02 OrthoFinder output from all 47 species
Ceric.25G071300.1 GAUT8, QUA1,... glycosyltransferase (QUA1) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
GSVIVT01030583001 LGT4, GAUT10 Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os11g03160.1 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Ore_g33568 GAUT14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43648 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11909 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03136 GAUT14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09889 LGT4, GAUT10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32063 LGT1, GAUT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04446 GAUT9 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 371 685
No external refs found!