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  5. Spa_g55815

Spa_g55815


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55815
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00149460 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00031410 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
AT3G23270 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Aev_g38912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Ceric.33G007900.1 Ceric.33G007900 not classified & original description: pacid=50607060... 0.03 OrthoFinder output from all 47 species
Dac_g12357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020014001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
GSVIVT01035215001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
MA_10427405g0020 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
MA_10430532g0010 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Msp_g15592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g005590.2.1 Solyc03g005590 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Tin_g26046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015467_P001 Zm00001e015467 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 602 649
IPR000408 Reg_chr_condens 496 545
IPR000408 Reg_chr_condens 432 481
IPR000408 Reg_chr_condens 379 428
IPR000408 Reg_chr_condens 328 376
IPR000306 Znf_FYVE 653 719
IPR027988 BRX_N 902 931
IPR013591 Brevis_radix_dom 1053 1106
No external refs found!