Aliases : ATMBD6, MBD6
Description : methylation reader *(MBD5-6) & original description: none
Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g55639 | |
Cluster | HCCA: Cluster_50 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene44531.t1 | ATMBD6, MBD6,... | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene62285.t1 | ATMBD6, MBD6,... | methylation reader *(MBD5-6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0158.g053875 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: CDS=259-3537 | 0.04 | OrthoFinder output from all 47 species | |
Dde_g00835 | No alias | methylation reader *(MBD5-6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g11942 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g05822 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g22182 | ATMBD6, MBD6 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g16912 | MBD05, MBD5, ATMBD5 | methylation reader *(MBD5-6) & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0004664 | prephenate dehydratase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006558 | L-phenylalanine metabolic process | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009094 | L-phenylalanine biosynthetic process | IEP | HCCA |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
BP | GO:1902221 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process | IEP | HCCA |
BP | GO:1902223 | erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001739 | Methyl_CpG_DNA-bd | 471 | 521 |
No external refs found! |