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  5. Spa_g55256

Spa_g55256


Description : E3 ubiquitin ligase *(PPRT) & original description: none


Gene families : OG0004649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g55256
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g49900.1 LOC_Os03g49900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10044491g0010 No alias Kinesin-like protein KIN-7K, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Spa_g52611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 1 164
No external refs found!