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  5. Spa_g54862

Spa_g54862 (TOM40)


Aliases : TOM40

Description : channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system & original description: none


Gene families : OG0002328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54862

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00124540 TOM40,... Protein translocation.mitochondrion.outer mitochondrion... 0.03 OrthoFinder output from all 47 species
AT3G20000 TOM40 translocase of the outer mitochondrial membrane 40 0.03 OrthoFinder output from all 47 species
Adi_g082046 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Aev_g01304 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Ala_g01261 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Ala_g15992 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Ceric.22G037300.1 TOM40, Ceric.22G037300 channel-forming component *(Tom40) of outer... 0.06 OrthoFinder output from all 47 species
Cre10.g424450 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.01 OrthoFinder output from all 47 species
Dac_g04134 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Dac_g36688 TOM40 channel-forming component *(Tom40) of outer... 0.05 OrthoFinder output from all 47 species
Dcu_g11812 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
GSVIVT01038525001 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.03 OrthoFinder output from all 47 species
Gb_29141 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.03 OrthoFinder output from all 47 species
LOC_Os01g16910.1 TOM40, LOC_Os01g16910 component Tom40 of outer mitochondrion membrane TOM... 0.07 OrthoFinder output from all 47 species
MA_27666g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.02 OrthoFinder output from all 47 species
Mp3g10590.1 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.03 OrthoFinder output from all 47 species
Sam_g48816 No alias channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Solyc06g007710.4.1 TOM40, Solyc06g007710 component Tom40 of outer mitochondrion membrane TOM... 0.08 OrthoFinder output from all 47 species
Solyc06g082793.1.1 TOM40, Solyc06g082793 component Tom40 of outer mitochondrion membrane TOM... 0.09 OrthoFinder output from all 47 species
Tin_g02612 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Zm00001e025489_P003 TOM40, Zm00001e025489 component Tom40 of outer mitochondrion membrane TOM... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 50 322
No external refs found!