Spa_g54382


Description : not classified & original description: none


Gene families : OG0000658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54382
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Dcu_g26790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007559 No alias not classified & original description: CDS=1-1374 0.02 OrthoFinder output from all 47 species
Sam_g03770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g061490.3.1 Solyc08g061490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!