Spa_g54311 (AGL9, SEP3)

Aliases : AGL9, SEP3

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g54311
Cluster	HCCA: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method
AT2G03710	AGL3, SEP4	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT2G14210	ANR1, AGL44	AGAMOUS-like 44	0.03	OrthoFinder output from all 47 species
AT2G45650	AGL6	AGAMOUS-like 6	0.03	OrthoFinder output from all 47 species
Aev_g09951	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11883	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g26897	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g38630	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49767.t1	STK, AGL11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene72145.t2	AGL30, Aspi01Gene72145	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0116.g046386	AGL65	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.05G029400.1	AGL16, Ceric.05G029400	MADS/AGL-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.12G051800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g30103	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01009171001	SVP, AGL22	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01019883001	GL19, AGL19	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01037022001	AGL62	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01038474001	AGL16	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
LOC_Os02g07430.1	AGL32, TT16,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os03g54170.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os04g52410.2	AGL32, TT16,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os05g11380.1	STK, AGL11,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os06g06750.1	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.05	OrthoFinder output from all 47 species
LOC_Os12g10540.3	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_13933g0010	AGL13	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_18048g0010	AGL21	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
MA_491676g0010	AGL6	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_51624g0010	SOC1, AGL20, ATSOC1	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
MA_9841429g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Ore_g28516	AGL66	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g09828	AGL65	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32449	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g57086	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006239	SHP2, AGL5	not classified & original description: CDS=497-1018	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011014	AGL9, SEP3	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g25658	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	108	155
IPR002487	TF_Kbox	182	269

External Links

No external refs found!

Spa_g54311 (AGL9, SEP3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation