Spa_g54234


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g54234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00129840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Adi_g005766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079818 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46730 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25838 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18507 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55750 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23407 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23677 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15587.t1 DOT4, Aspi01Gene15587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t3 Aspi01Gene28051 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35154.t1 Aspi01Gene35154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008050 No alias not classified & original description: CDS=1-3306 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009216 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011650 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2676 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g024030 No alias not classified & original description: CDS=1-1224 0.05 OrthoFinder output from all 47 species
Azfi_s0094.g043491 No alias not classified & original description: CDS=1-2859 0.04 OrthoFinder output from all 47 species
Azfi_s0213.g058286 No alias not classified & original description: CDS=1-3009 0.04 OrthoFinder output from all 47 species
Azfi_s0256.g060514 No alias RecA-activity modulator *(RecX) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0309.g064088 No alias not classified & original description: CDS=1-441 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065265 No alias not classified & original description: CDS=1-2829 0.04 OrthoFinder output from all 47 species
Azfi_s2265.g110088 No alias not classified & original description: CDS=116-2917 0.04 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G063100.1 Ceric.14G063100 not classified & original description: pacid=50634149... 0.04 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30157 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15898 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25739 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26403 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46559 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g18306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25822 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46020 MEF22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32347 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02784 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63597 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30639 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05062 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10282 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14215 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32654 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33573 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018986 No alias not classified & original description: CDS=1-1941 0.04 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo442088 CRR22 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32773 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03388 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 123
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 225 273
No external refs found!