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  5. Spa_g53450

Spa_g53450 (TRX P, TRX z)


Aliases : TRX P, TRX z

Description : cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ) & original description: none


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53450

Target Alias Description ECC score Gene Family Method Actions
AT3G06730 TRX P, TRX z Thioredoxin z 0.04 OrthoFinder output from all 47 species
Adi_g045869 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Aop_g26991 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Dcu_g15316 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Ehy_g00464 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Gb_29029 TRX P, TRX z Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.04 OrthoFinder output from all 47 species
LOC_Os08g29110.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.03 OrthoFinder output from all 47 species
Len_g03604 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Solyc01g096480.2.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 100 177
No external refs found!