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  5. Spa_g53084

Spa_g53084 (CPS, ATCPS1, ABC33, CPS1, GA1)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1

Description : EC_5.5 intramolecular lyase & original description: none


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g53084

Target Alias Description ECC score Gene Family Method Actions
Adi_g024705 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057757 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083446 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13824 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G016800.1 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os02g36220.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29991 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38612 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38613 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g005640.4.1 KS, KS1, ATKS1,... mono-/sesquiterpene-/diterpene synthase. ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
Tin_g30543 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e017819_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
Zm00001e040179_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 270 476
IPR005630 Terpene_synthase_metal-bd 519 781
No external refs found!