Aliases : ATRAD21.3, SYN4
Description : not classified & original description: none
Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00174610 | ATRAD21.3, SYN4,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
AT3G59550 | SYN3, ATRAD21.2, ATSYN3 | Rad21/Rec8-like family protein | 0.02 | OrthoFinder output from all 47 species | |
Ala_g22608 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g18160 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g13918 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.39G042400.1 | ATRAD21.3, SYN4,... | not classified & original description: pacid=50582800... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g67250.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g41110.1 | AtRAD21.1, SYN2,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species | |
Len_g49535 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g06270 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
MA_168879g0020 | SYN3, ATRAD21.2, ATSYN3 | Sister chromatid cohesion 1 protein 3 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
MA_673714g0010 | ATRAD21.3, SYN4 | Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp5g04800.1 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g41601 | ATRAD21.3, SYN4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g62398 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g27905 | No alias | mitotic-specific Kleisin-type component *(SCC1) of... | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g008740.2.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018959_P001 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028559_P002 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006909 | Rad21/Rec8_C_eu | 949 | 995 |
No external refs found! |